SILVA

Welcome to the SILVA rRNA database project

A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data.

SILVA provides comprehensive, quality checked and regularly updated datasets of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences for all three domains of life (Bacteria, Archaea and Eukarya).

SILVA are the official databases of the software package ARB.

For more background information Opens internal link in current windowClick here

ARB

The software package ARB represents a graphically-oriented, fully-integrated package of cooperating software tools for handling and analysis of sequence information.

The ARB project has been started more than 15 years ago by Wolfgang Ludwig at the Technical University in Munich, Germany, see Opens external link in new window www.arb-home.de.

The MEGX.net data portal

Visit our partner site www.megx.net, the data portal for Marine Ecological Genomix, to get a feeling how your research can be improved using integrated databases.

Citation

Pruesse, E., C. Quast, K. Knittel, B. Fuchs, W. Ludwig, J. Peplies, and F. O. Glöckner. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Opens external link in new window Nuc. Acids Res. 2007; Vol. 35, No. 21, p. 7188-7196

SILVA Terms of Use/License Information

SILVA uses a dual licensing model. In short, browsing and deploying the SILVA database content displayed on the SILVA webportal is free for all (academic and non-academic users) whereas all downloads are only free for academic users. Both, academic and non-academic users should have a look at the SILVA Terms of Use/License Information for more details.

Partners

Please visit our partners. They facilitate the SILVA  database project.

          

News

11.05.2012

Pre-release information for SILVA 111

After quite a long time here is the first pre-release information for SILVA release 111.


10.05.2012

SINA (SILVA INcremental Aligner) published

The SINA (SILVA INcremental Aligner) paper has just been published in the journal Bioinformatics.


21.04.2012

SILVA heavily cited - Thank You

As published in the last issue of Laborjournal SILVA is one of the most cited papers in the last years. A big "Thank You" to all of you. It is a pleasure to work with such a great community. The SILVA Team.


13.03.2012

SILVA release 110 skipped

SILVA release 110 skipped. Preparing now for EMBL release 111. Sorry for any inconveniences. The SILVA Team.


Release information for full release - SILVA 108

      SSU Parc SSU Ref LSU Parc LSU Ref
Minimal length     300 1200/900 300 1900
Quality filtering     basic strong basic strong
Guide Tree     no yes no yes
Release version     108 108 108 108
Release date     01.09.11 01.09.11 01.09.11 01.09.11
Aligned rRNA sequences     2,492,653 618,442 269,240 23,600

SILVA RSS Feed + ARB & SILVA User Group

Browsing the SILVA webpage

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